Affymetrix Human Gene 1.0-ST Array Transcriptcluster Revision 5 annotation data (chip hugene10sttranscriptcluster)


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Documentation for package ‘hugene10sttranscriptcluster.db’ version 5.0.1

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hugene10sttranscriptcluster Bioconductor annotation data package
hugene10sttranscriptcluster.db Bioconductor annotation data package
hugene10sttranscriptclusterACCNUM Map Manufacturer identifiers to Accession Numbers
hugene10sttranscriptclusterALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
hugene10sttranscriptclusterCHR Map Manufacturer IDs to Chromosomes
hugene10sttranscriptclusterCHRLENGTHS A named vector for the length of each of the chromosomes
hugene10sttranscriptclusterCHRLOC Map Manufacturer IDs to Chromosomal Location
hugene10sttranscriptclusterCHRLOCEND Map Manufacturer IDs to Chromosomal Location
hugene10sttranscriptclusterENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
hugene10sttranscriptclusterENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
hugene10sttranscriptclusterENTREZID Map between Manufacturer Identifiers and Entrez Gene
hugene10sttranscriptclusterENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
hugene10sttranscriptclusterENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
hugene10sttranscriptclusterGENENAME Map between Manufacturer IDs and Genes
hugene10sttranscriptclusterGO Map between Manufacturer IDs and Gene Ontology (GO)
hugene10sttranscriptclusterGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
hugene10sttranscriptclusterGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
hugene10sttranscriptclusterLOCUSID Map between Manufacturer Identifiers and Entrez Gene
hugene10sttranscriptclusterMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
hugene10sttranscriptclusterMAPCOUNTS Number of mapped keys for the maps in package hugene10sttranscriptcluster.db
hugene10sttranscriptclusterOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hugene10sttranscriptclusterORGANISM The Organism information for hugene10sttranscriptcluster
hugene10sttranscriptclusterORGPKG The Organism information for hugene10sttranscriptcluster
hugene10sttranscriptclusterPATH Mappings between probe identifiers and KEGG pathway identifiers
hugene10sttranscriptclusterPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
hugene10sttranscriptclusterPFAM Map Manufacturer IDs to Pfam IDs
hugene10sttranscriptclusterPMID Map between Manufacturer Identifiers and PubMed Identifiers
hugene10sttranscriptclusterPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
hugene10sttranscriptclusterPROSITE Map Manufacturer IDs to PROSITE ID
hugene10sttranscriptclusterREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
hugene10sttranscriptclusterSYMBOL Map between Manufacturer Identifiers and Gene Symbols
hugene10sttranscriptclusterUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
hugene10sttranscriptclusterUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
hugene10sttranscriptclusterUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
hugene10sttranscriptcluster_dbconn Collect information about the package annotation DB
hugene10sttranscriptcluster_dbfile Collect information about the package annotation DB
hugene10sttranscriptcluster_dbInfo Collect information about the package annotation DB
hugene10sttranscriptcluster_dbschema Collect information about the package annotation DB